Shiny Application

lipIDApp()

Launch Shiny Web App interface

Quick Annotation

One function to annotate lipidomics data

lipID()

Annotate untargeted lipidomics using rule-based matching

Libraries

Select or add custom libraries for matching

get_libs()

Get libraries for matching with specific mode and type

add_lib()

Add a custom library for matching

add_lib_collection()

Bulk add multiple libraries for lipid matching

MS matching

Functions to perform MS1 and MS2 matching

match_ms1()

Match lipid molecules using MS1 precursor mass

match_ms2()

Match lipid molecules from MS2 data

merge_ms2()

Merge MS2 data with MS1 features

MS2 files

Read ms2 files

read_ms2()

Read MS2 files